ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8j1bA2 - ECOD Domain | ECOD

ECOD/Domains/e8j1bA2

e8j1bA2

UID: 003060079

PDB

Range: A:453-638,A:660-755
PDB: 8J1B chain A(all domains)

Molecule: Transient receptor potential cation channel subfamily V member 4

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

ruthenium(6+) azanide pentaamino(oxido)ruthenium (1/4/2)R2R
N-[(2S)-1-{4-[N-(2,4-dichlorobenzene-1-sulfonyl)-L-seryl]piperazin-1-yl}-4-methyl-1-oxopentan-2-yl]-1-benzothiophene-2-carboxamideXQ3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8J1B RCSB PDB: 8J1B PDBe: 8J1B

Downloads

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