ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ymiI1 - ECOD Domain | ECOD

ECOD/Domains/e7ymiI1

e7ymiI1

UID: 003060323

PDB

Range: I:1-34
PDB: 7YMI chain I(all domains)

Molecule: Photosystem II protein PsbI

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein I, PsbI(5035)

HH-groupPhotosystem II reaction center protein I, PsbI(5035.1)

TT-groupPhotosystem II reaction center protein I, PsbI(5035.1.1)

FFamilyPsbI(5035.1.1.1)

Ligands

in contact, ≤ 4 Å

(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene8CT
Chlorophyll dCL7
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Pfam Families

Photosystem II reaction centre I protein (PSII 4.8 kDa protein)

External Links

ECOD PDB View: 7YMI RCSB PDB: 7YMI PDBe: 7YMI

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.