ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ymiT1 - ECOD Domain | ECOD

ECOD/Domains/e7ymiT1

e7ymiT1

UID: 003060327

PDB

Range: T:1-28
PDB: 7YMI chain T(all domains)

Molecule: Photosystem II reaction center protein T

3D Structure

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Related Domains

Browse other domains in PsbT →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein T, PsbT(3390)

HH-groupPhotosystem II reaction center protein T, PsbT(3390.1)

TT-groupPhotosystem II reaction center protein T, PsbT(3390.1.1)

FFamilyPsbT(3390.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043
(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene8CT
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

Pfam Families

Photosystem II reaction centre T protein

External Links

ECOD PDB View: 7YMI RCSB PDB: 7YMI PDBe: 7YMI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Chlorophyll dCL7

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.