ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ymiX1 - ECOD Domain | ECOD

ECOD/Domains/e7ymiX1

e7ymiX1

UID: 003060328

PDB

Range: X:2-36
PDB: 7YMI chain X(all domains)

Molecule: Photosystem II reaction center X protein

3D Structure

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Related Domains

Browse other domains in PsbX →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II PsbX protein(3493)

HH-groupPhotosystem II PsbX protein(3493.1)

TT-groupPhotosystem II PsbX protein(3493.1.1)

FFamilyPsbX(3493.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043within 5 Å only
(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene8CT
Chlorophyll d

Pfam Families

Photosystem II reaction centre X protein (PsbX)

External Links

ECOD PDB View: 7YMI RCSB PDB: 7YMI PDBe: 7YMI

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.