ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c9eA1 - ECOD Domain | ECOD

ECOD/Domains/e8c9eA1

e8c9eA1

UID: 003060590

PDB

Range: A:585-789
PDB: 8C9E chain A(all domains)

Molecule: Isoleucine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Ligands

in contact, ≤ 4 Å

N-[ISOLEUCINYL]-N'-[ADENOSYL]-DIAMINOSUFONEILA
Lithium ionLI
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

ECOD PDB View: 8C9E RCSB PDB: 8C9E PDBe: 8C9E

Downloads

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