ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8b2lS11 - ECOD Domain | ECOD

ECOD/Domains/e8b2lS11

e8b2lS11

UID: 003060975

PDB

Range: S1:19-150
PDB: 8B2L chain S1(all domains)

Molecule: 40S ribosomal protein S14-2

3D Structure

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Related Domains

Browse other domains in Ribosomal_S11 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRibosomal_S11(2484.1.1.7)

Ligands

in contact, ≤ 4 Å

SpermineSPM
drugDrugBank DB00127within 5 Å only
Potassium ionK
metal
Magnesium ion

Pfam Families

PF00411Ribosomal_S11

Ribosomal protein S11

ClanCL0267S11_L18p

External Links

ECOD PDB View: 8B2L RCSB PDB: 8B2L PDBe: 8B2L

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.