ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8evyB1 - ECOD Domain | ECOD

ECOD/Domains/e8evyB1

e8evyB1

UID: 003061310

PDB

Range: B:3-112
PDB: 8EVY chain B(all domains)

Molecule: D-alanine--D-alanine ligase B

3D Structure

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Related Domains

Browse other domains in Dala_Dala_lig_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyDala_Dala_lig_N(2003.1.10.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171within 5 Å only
D-alanineDAL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01820Dala_Dala_lig_N

D-ala D-ala ligase N-terminus

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8EVY RCSB PDB: 8EVY PDBe: 8EVY

Downloads

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