ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8fxuA2 - ECOD Domain | ECOD

ECOD/Domains/e8fxuA2

e8fxuA2

UID: 003061323

PDB

Range: A:1-109,A:259-311
PDB: 8FXU chain A(all domains)

Molecule: D-galactose/methyl-galactoside binding periplasmic protein MglB

3D Structure

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Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Chloride ionCL
2-bromo-1-[6-(dimethylamino)naphthalen-2-yl]ethan-1-oneYDQ

Shown in the structure viewer.

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 8FXU RCSB PDB: 8FXU PDBe: 8FXU

Downloads

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Drug annotations from DrugDomain.