ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8edeB1 - ECOD Domain | ECOD

ECOD/Domains/e8edeB1

e8edeB1

UID: 003062543

PDB

Range: B:1-221
PDB: 8EDE chain B(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase isozyme L1

3D Structure

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Related Domains

Browse other domains in Peptidase_C12 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C12(219.1.1.9)

Ligands

in contact, ≤ 4 Å

2-[(4-chlorophenyl)-methyl-amino]-~{N}'-ethanoyl-ethanehydrazideWEU

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01088Peptidase_C12

Ubiquitin carboxyl-terminal hydrolase, family 1

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 8EDE RCSB PDB: 8EDE PDBe: 8EDE

Downloads

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