ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1zbuD1 - ECOD Domain | ECOD

ECOD/Domains/e1zbuD1

e1zbuD1

UID: 000306289

PDB

Range: D:125-349
PDB: 1ZBU chain D(all domains)
UniProt: Q8IV48 (all domains)
Gene: ERI1

Molecule: 3'-5' exonuclease ERI1

3D Structure

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Related Domains

Browse other domains in RNase_T →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_T(2484.1.1.13)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00929RNase_T

Exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 1ZBU RCSB PDB: 1ZBU PDBe: 1ZBU UniProt: Q8IV48

Downloads

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