ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8crpA1 - ECOD Domain | ECOD

ECOD/Domains/e8crpA1

e8crpA1

UID: 003063803

PDB

Range: A:12-134
PDB: 8CRP chain A(all domains)

Molecule: Streptavidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

Co-linked Tetra-amido macrocyclic ligandVJL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 8CRP RCSB PDB: 8CRP PDBe: 8CRP

Downloads

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