ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gonD1 - ECOD Domain | ECOD

ECOD/Domains/e2gonD1

e2gonD1

UID: 000306480

PDB

Range: D:145-278
PDB: 2GON chain D(all domains)
UniProt: P12497 (all domains)
Gene: gag-pol

Molecule: Capsid protein p24 (CA)

3D Structure

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Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 2GON RCSB PDB: 2GON PDBe: 2GON UniProt: P12497

Downloads

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