ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d6mA5 - ECOD Domain | ECOD

ECOD/Domains/e8d6mA5

e8d6mA5

UID: 003066044

PDB

Range: A:5-87,A:725-829
PDB: 8D6M chain A(all domains)

Molecule: Saxiphilin

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

[(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate9SL

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 8D6M RCSB PDB: 8D6M PDBe: 8D6M

Downloads

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