ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8b6fA01 - ECOD Domain | ECOD

ECOD/Domains/e8b6fA01

e8b6fA01

UID: 003066188

PDB

Range: A0:203-477
PDB: 8B6F chain A0(all domains)

Molecule: Lipid-A-disaccharide synthase

3D Structure

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Related Domains

Browse other domains in LpxB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyLpxB(7512.1.1.9)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
CardiolipinCDL
Magnesium ionMG
metal

Pfam Families

Lipid-A-disaccharide synthetase

ClanCL0113GT-B

External Links

ECOD PDB View: 8B6F RCSB PDB: 8B6F PDBe: 8B6F

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Shown in the structure viewer. Drug annotations from DrugDomain.