ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8f6mA1 - ECOD Domain | ECOD

ECOD/Domains/e8f6mA1

e8f6mA1

UID: 003066294

PDB

Range: A:12-115,A:218-395
PDB: 8F6M chain A(all domains)

Molecule: Pyruvate kinase PKM

3D Structure

Loading viewer...

Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
AlanineALA
drugDrugBank DB00160
Potassium ion

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8F6M RCSB PDB: 8F6M PDBe: 8F6M

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

K

metal

MANGANESE (II) IONMN

metal

Succinic acidSIN

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.