ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f6mF1 - ECOD Domain | ECOD

ECOD/Domains/e8f6mF1

e8f6mF1

UID: 003066306

PDB

Range: F:12-115,F:218-395
PDB: 8F6M chain F(all domains)

Molecule: Pyruvate kinase PKM

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
AlanineALA
drugDrugBank DB00160
(E)-2-METHYL-3-PHOSPHONOACRYLATE

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8F6M RCSB PDB: 8F6M PDBe: 8F6M

Downloads

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Potassium ionK

metal

MANGANESE (II) IONMN

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.