ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gf0A2 - ECOD Domain | ECOD

ECOD/Domains/e8gf0A2

e8gf0A2

UID: 003066425

PDB

Range: A:366-531
PDB: 8GF0 chain A(all domains)

Molecule: Lytic transglycosylase domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilySLT(235.1.1.9)

Ligands

in contact, ≤ 4 Å

2,2-dimethyl-3-oxobutyl 2-acetamido-2-deoxy-beta-D-glucopyranosideUM9

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Transglycosylase SLT domain

ClanCL0037Lysozyme

External Links

ECOD PDB View: 8GF0 RCSB PDB: 8GF0 PDBe: 8GF0

Downloads

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