ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8a1xD1 - ECOD Domain | ECOD

ECOD/Domains/e8a1xD1

e8a1xD1

UID: 003066818

PDB

Range: D:8-208
PDB: 8A1X chain D(all domains)

Molecule: Na(+)-translocating NADH-quinone reductase subunit D

3D Structure

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Related Domains

Browse other domains in Rnf-Nqr →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupNa(+)-translocating NADH-quinone reductase subunit D(3921)

HH-groupNa(+)-translocating NADH-quinone reductase subunit D(3921.1)

TT-groupNa(+)-translocating NADH-quinone reductase subunit D(3921.1.1)

FFamilyRnf-Nqr(3921.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247within 5 Å only
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
FE2/S2 (INORGANIC) CLUSTERFES

Pfam Families

PF02508Rnf-Nqr

Rnf-Nqr subunit, membrane protein

External Links

ECOD PDB View: 8A1X RCSB PDB: 8A1X PDBe: 8A1X

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.