ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8abqD1 - ECOD Domain | ECOD

ECOD/Domains/e8abqD1

e8abqD1

UID: 003067090

PDB

Range: D:206-404
PDB: 8ABQ chain D(all domains)

Molecule: Sorting nexin-5

3D Structure

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Related Domains

Browse other domains in Vps5 →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupBAR/IMD domain-like(4177)

HH-groupBAR/IMD domain-like(4177.1)

TT-groupBAR/IMD domain-like(4177.1.1)

FFamilyVps5(4177.1.1.5)

Ligands

in contact, ≤ 4 Å

PLATINUM (II) IONPT
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Vps5 C terminal like

ClanCL0145Golgi-transport

External Links

ECOD PDB View: 8ABQ RCSB PDB: 8ABQ PDBe: 8ABQ

Downloads

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