ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8amsD1 - ECOD Domain | ECOD

ECOD/Domains/e8amsD1

e8amsD1

UID: 003067407

PDB

Range: D:9-92
PDB: 8AMS chain D(all domains)

Molecule: Tripartite motif-containing protein 2

3D Structure

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Related Domains

Browse other domains in zf-RING_UBOX →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-RING_UBOX(376.1.1.20)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL)

GlycerinGOL
DrugBank DB09462
3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL

Pfam Families

PF13445zf-RING_UBOX

RING-type zinc-finger

ClanCL0229RING

External Links

ECOD PDB View: 8AMS RCSB PDB: 8AMS PDBe: 8AMS

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.