ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aq4A1 - ECOD Domain | ECOD

ECOD/Domains/e8aq4A1

e8aq4A1

UID: 003067444

PDB

Range: A:1-213,A:481-509
PDB: 8AQ4 chain A(all domains)

Molecule: Apolipoprotein N-acyltransferase

3D Structure

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Related Domains

Browse other domains in LNT_N →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupApolipoprotein N-acyltransferase transmembrane domain(1175)

HH-groupApolipoprotein N-acyltransferase transmembrane domain(1175.1)

TT-groupApolipoprotein N-acyltransferase transmembrane domain(1175.1.1)

FFamilyLNT_N(1175.1.1.1)

Ligands

in contact, ≤ 4 Å

PentaglymePG6
drugDrugBank DB02580
[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate6OU
Chloride ion

Pfam Families

Apolipoprotein N-acyltransferase N-terminal domain

External Links

ECOD PDB View: 8AQ4 RCSB PDB: 8AQ4 PDBe: 8AQ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANEPG5

~{N}-tridecylmethanethioamideQGT

+ 3 additives (Acetate, Glycerin, Dodecyl-beta-d-maltoside)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.