ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bddB3 - ECOD Domain | ECOD

ECOD/Domains/e8bddB3

e8bddB3

UID: 003068499

PDB

Range: B:24-373
PDB: 8BDD chain B(all domains)

Molecule: Alginate lyase family protein

3D Structure

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Related Domains

Browse other domains in Alginate_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyAlginate_lyase(109.2.1.17)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05426Alginate_lyase

Alginate lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 8BDD RCSB PDB: 8BDD PDBe: 8BDD

Downloads

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