ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bjoA1 - ECOD Domain | ECOD

ECOD/Domains/e8bjoA1

e8bjoA1

UID: 003069438

PDB

Range: A:0-243
PDB: 8BJO chain A(all domains)

Molecule: Alginate lyase

3D Structure

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Related Domains

Browse other domains in Alginate_lyase2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyAlginate_lyase2(10.1.1.27)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08787Alginate_lyase2

Alginate lyase

ClanCL0004Concanavalin

External Links

ECOD PDB View: 8BJO RCSB PDB: 8BJO PDBe: 8BJO

Downloads

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