ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bpdA1 - ECOD Domain | ECOD

ECOD/Domains/e8bpdA1

e8bpdA1

UID: 003070336

PDB

Range: A:25-394
PDB: 8BPD chain A(all domains)

Molecule: Glycosyl hydrolase

3D Structure

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Related Domains

Browse other domains in Mef1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMef1(2002.1.1.258)

Ligands

in contact, ≤ 4 Å

(2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3CX
Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Endo-alpha(1,4)-fucoidanase Mef1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8BPD RCSB PDB: 8BPD PDBe: 8BPD

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.