ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bzxA2 - ECOD Domain | ECOD

ECOD/Domains/e8bzxA2

e8bzxA2

UID: 003071091

PDB

Range: A:284-456
PDB: 8BZX chain A(all domains)

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

2-[4-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-3-methyl-5-propanoyl-thiophen-2-yl]ethyl dihydrogen phosphateSW6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 8BZX RCSB PDB: 8BZX PDBe: 8BZX

Downloads

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