ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c3oB3 - ECOD Domain | ECOD

ECOD/Domains/e8c3oB3

e8c3oB3

UID: 003071293

PDB

Range: B:537-571,B:619-885
PDB: 8C3O chain B(all domains)

Molecule: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

3D Structure

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Related Domains

Browse other domains in Endonuclease_NS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyEndonuclease_NS(378.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Iodide ionIOD

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF01223Endonuclease_NS

DNA/RNA non-specific endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 8C3O RCSB PDB: 8C3O PDBe: 8C3O

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.