ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c9gB4 - ECOD Domain | ECOD

ECOD/Domains/e8c9gB4

e8c9gB4

UID: 003071462

PDB

Range: B:1-176,B:523-584
PDB: 8C9G chain B(all domains)

Molecule: Isoleucine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1(2005.1.1.1)

Ligands

in contact, ≤ 4 Å

MupirocinMRC
drugDrugBank DB00410

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

ECOD PDB View: 8C9G RCSB PDB: 8C9G PDBe: 8C9G

Downloads

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Drug annotations from DrugDomain.