ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8cm5C4 - ECOD Domain | ECOD

ECOD/Domains/e8cm5C4

e8cm5C4

UID: 003072724

PDB

Range: C:192-441
PDB: 8CM5 chain C(all domains)

Molecule: Formate dehydrogenase, alpha subunit, selenocysteine-containing

3D Structure

Loading viewer...

Related Domains

Browse other domains in Molybdopterin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin(2003.2.1.1)

Ligands

in contact, ≤ 4 Å

Hydrosulfuric acidH2S
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
Iron/sulfur clusterSF4
Tungsten ion

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

External Links

ECOD PDB View: 8CM5 RCSB PDB: 8CM5 PDBe: 8CM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

W

metal

Shown in the structure viewer. Drug annotations from DrugDomain.