ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cm6C2 - ECOD Domain | ECOD

ECOD/Domains/e8cm6C2

e8cm6C2

UID: 003072746

PDB

Range: C:36-101
PDB: 8CM6 chain C(all domains)

Molecule: Formate dehydrogenase, alpha subunit, selenocysteine-containing

3D Structure

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Related Domains

Browse other domains in Molybdop_Fe4S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFormate dehydrogenase/DMSO reductase, domain 1(1001)

HH-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1)

TT-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1.1)

FFamilyMolybdop_Fe4S4(1001.1.1.1)

Ligands

in contact, ≤ 4 Å

2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04879Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 8CM6 RCSB PDB: 8CM6 PDBe: 8CM6

Downloads

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