ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cmhA1 - ECOD Domain | ECOD

ECOD/Domains/e8cmhA1

e8cmhA1

UID: 003072811

PDB

Range: A:3-81
PDB: 8CMH chain A(all domains)

Molecule: HLA class II histocompatibility antigen, DR alpha chain

3D Structure

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Related Domains

Browse other domains in MHC_II_alpha →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_alpha(233.1.1.3)

Ligands

in contact, ≤ 4 Å

CysteamineDHL
drugDrugBank DB00847

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00993MHC_II_alpha

Class II histocompatibility antigen, alpha domain

ClanCL0343MHC

External Links

ECOD PDB View: 8CMH RCSB PDB: 8CMH PDBe: 8CMH

Downloads

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