ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cmsAAA1 - ECOD Domain | ECOD

ECOD/Domains/e8cmsAAA1

e8cmsAAA1

UID: 003072927

PDB

Range: AAA:6-231
PDB: 8CMS chain AAA(all domains)

Molecule: Ubiquitin thioesterase OTUB2

3D Structure

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Related Domains

Browse other domains in Peptidase_C65 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C65(219.1.1.48)

Ligands

in contact, ≤ 4 Å

(1~{S},2~{S})-~{N}'-ethanoyl-2-(3-methylphenyl)cyclopropane-1-carbohydrazideV2X

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10275Peptidase_C65

Peptidase C65 Otubain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 8CMS RCSB PDB: 8CMS PDBe: 8CMS

Downloads

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