ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8crnA1 - ECOD Domain | ECOD

ECOD/Domains/e8crnA1

e8crnA1

UID: 003073052

PDB

Range: A:13-134
PDB: 8CRN chain A(all domains)

Molecule: Streptavidin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Co-linked Tetra-amido macrocyclic ligandVJL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 8CRN RCSB PDB: 8CRN PDBe: 8CRN

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure