ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8d84F2 - ECOD Domain | ECOD

ECOD/Domains/e8d84F2

e8d84F2

UID: 003073594

PDB

Range: F:1-20,F:233-420
PDB: 8D84 chain F(all domains)

Molecule: UDP-N-acetylglucosamine 1-carboxyvinyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in EPSP_synthase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupEPT/RTPC-like(328.6)

TT-groupEPT/RTPC-like(328.6.1)

FFamilyEPSP_synthase(328.6.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acidEPZ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00275EPSP_synthase

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

ClanCL0290EPT_RTPC

External Links

ECOD PDB View: 8D84 RCSB PDB: 8D84 PDBe: 8D84

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure