ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d8yB1 - ECOD Domain | ECOD

ECOD/Domains/e8d8yB1

e8d8yB1

UID: 003073612

PDB

Range: B:21-307
PDB: 8D8Y chain B(all domains)

Molecule: ChoE

3D Structure

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Related Domains

Browse other domains in Lipase_GDSL →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSGNH hydrolase(2007.5)

TT-groupSGNH hydrolase(2007.5.1)

FFamilyLipase_GDSL(2007.5.1.1)

Ligands

in contact, ≤ 4 Å

2-(Trimethylammonium)Ethyl ThiolETM
drugDrugBank DB01803
AcetylthiocholineAT3
Chloride ionCL

Pfam Families

PF00657Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

ClanCL0264SGNH_hydrolase

External Links

ECOD PDB View: 8D8Y RCSB PDB: 8D8Y PDBe: 8D8Y

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.