ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dn5D1 - ECOD Domain | ECOD

ECOD/Domains/e8dn5D1

e8dn5D1

UID: 003074044

PDB

Range: D:8-221
PDB: 8DN5 chain D(all domains)

Molecule: Glycine receptor subunit alpha-1

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
N-AcetylglucosamineNAG
drugDrugBank DB00141
nonane

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 8DN5 RCSB PDB: 8DN5 PDBe: 8DN5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

UndecaneUND

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.