ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dokJ1 - ECOD Domain | ECOD

ECOD/Domains/e8dokJ1

e8dokJ1

UID: 003074108

PDB

Range: J:522-546,J:572-662
PDB: 8DOK chain J(all domains)

Molecule: CRF-1_AE T/F100 HIV-1 gp41

3D Structure

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Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 8DOK RCSB PDB: 8DOK PDBe: 8DOK

Downloads

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