ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d1zB1 - ECOD Domain | ECOD

ECOD/Domains/e2d1zB1

e2d1zB1

UID: 000307425

PDB

Range: B:802-936
PDB: 2D1Z chain B(all domains)
UniProt: Q7SI98 (all domains)

Molecule: ENDO-1,4-BETA-D-XYLANASE

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 2D1Z RCSB PDB: 2D1Z PDBe: 2D1Z UniProt: Q7SI98

Downloads

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