ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dsmC2 - ECOD Domain | ECOD

ECOD/Domains/e8dsmC2

e8dsmC2

UID: 003074256

PDB

Range: C:8-161,C:392-427
PDB: 8DSM chain C(all domains)

Molecule: Nicotinamide phosphoribosyltransferase

3D Structure

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Related Domains

Browse other domains in NAMPT_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupNicotinate/Quinolinate PRTase N-terminal domain-like(325.1.4)

FFamilyNAMPT_N(325.1.4.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(3S)-N-[(1-benzothiophen-5-yl)methyl]-1-[6-(4-{2-[(2E)-3-(pyridin-3-yl)prop-2-enamido]ethyl}phenyl)thieno[2,3-d]pyrimidin-4-yl]piperidine-3-carboxamideTK0

+ 2 additives (Phosphate ion, Glycerol)

Phosphate ionPO4

Pfam Families

PF18127NAMPT_N

Nicotinamide phosphoribosyltransferase, N-terminal domain

External Links

ECOD PDB View: 8DSM RCSB PDB: 8DSM PDBe: 8DSM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.