ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8e9aB1 - ECOD Domain | ECOD

ECOD/Domains/e8e9aB1

e8e9aB1

UID: 003075161

PDB

Range: B:0-174
PDB: 8E9A chain B(all domains)

Molecule: Repair DNA polymerase X

3D Structure

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Related Domains

Browse other domains in NTP_transf_2,DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2,DNA_pol_B_thumb(316.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 8E9A RCSB PDB: 8E9A PDBe: 8E9A

Downloads

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