ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8edgI1 - ECOD Domain | ECOD

ECOD/Domains/e8edgI1

e8edgI1

UID: 003075284

PDB

Range: I:28-77
PDB: 8EDG chain I(all domains)

Molecule: Hermes transposase

3D Structure

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Related Domains

Browse other domains in zf-BED →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-BED(386.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

BED zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 8EDG RCSB PDB: 8EDG PDBe: 8EDG

Downloads

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