ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ekmB3 - ECOD Domain | ECOD

ECOD/Domains/e8ekmB3

e8ekmB3

UID: 003075611

PDB

Range: B:217-296
PDB: 8EKM chain B(all domains)

Molecule: ADP-ribosyltransferase binding component

3D Structure

Loading viewer...

Related Domains

Browse other domains in Binary_toxB →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCa-binding domain in anthrax protective antigen(5096)

HH-groupCa-binding domain in anthrax protective antigen(5096.1)

TT-groupCa-binding domain in anthrax protective antigen(5096.1.1)

FFamilyBinary_toxB(5096.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03495Binary_toxB

Clostridial binary toxin B/anthrax toxin PA Ca-binding domain

ClanCL0689TSP3

External Links

ECOD PDB View: 8EKM RCSB PDB: 8EKM PDBe: 8EKM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure