ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8em5D1 - ECOD Domain | ECOD

ECOD/Domains/e8em5D1

e8em5D1

UID: 003075785

PDB

Range: D:52-143
PDB: 8EM5 chain D(all domains)

Molecule: MmpS5

3D Structure

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Related Domains

Browse other domains in Mycobact_memb →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupSoluble domain of MmpS4(10.39)

TT-groupSoluble domain of MmpS4(10.39.1)

FFamilyMycobact_memb(10.39.1.1)

Ligands

in contact, ≤ 4 Å

Dodecaethylene glycol12P
Iodide ionIOD

+ 2 additives (Glycerin, Pentaethylene glycol)

GlycerinGOL

Pfam Families

PF05423Mycobact_memb

Mycobacterium membrane protein

External Links

ECOD PDB View: 8EM5 RCSB PDB: 8EM5 PDBe: 8EM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.