ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8evxB2 - ECOD Domain | ECOD

ECOD/Domains/e8evxB2

e8evxB2

UID: 003076993

PDB

Range: B:4-56,B:92-133
PDB: 8EVX chain B(all domains)

Molecule: D-alanine--D-alanine ligase A

3D Structure

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Related Domains

Browse other domains in Dala_Dala_lig_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyDala_Dala_lig_N(2003.1.10.2)

Ligands

in contact, ≤ 4 Å

[(4R)-4-azanyl-4,5-dihydro-1,2-oxazol-3-yl] dihydrogen phosphateDS0
Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01820Dala_Dala_lig_N

D-ala D-ala ligase N-terminus

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8EVX RCSB PDB: 8EVX PDBe: 8EVX

Downloads

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