ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f5zB1 - ECOD Domain | ECOD

ECOD/Domains/e8f5zB1

e8f5zB1

UID: 003077686

PDB

Range: B:195-411
PDB: 8F5Z chain B(all domains)

Molecule: Phytochrome A

3D Structure

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Related Domains

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Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF(223.1.1.3)

Ligands

in contact, ≤ 4 Å

3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acidO6E

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 8F5Z RCSB PDB: 8F5Z PDBe: 8F5Z

Downloads

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