ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8faeE1 - ECOD Domain | ECOD

ECOD/Domains/e8faeE1

e8faeE1

UID: 003078053

PDB

Range: E:120-202
PDB: 8FAE chain E(all domains)

Molecule: Envelope glycoprotein gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
1-[(2R)-4-(benzenecarbonyl)-2-methylpiperazin-1-yl]-2-(4-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)ethane-1,2-dione83G
within 5 Å only

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 8FAE RCSB PDB: 8FAE PDBe: 8FAE

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.