ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8fnjA1 - ECOD Domain | ECOD

ECOD/Domains/e8fnjA1

e8fnjA1

UID: 003080670

PDB

Range: A:1-48
PDB: 8FNJ chain A(all domains)

Molecule: Lamina-associated polypeptide 2, isoforms beta/gamma,Integrase

3D Structure

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Related Domains

Browse other domains in Integrase_Zn →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyIntegrase_Zn(101.1.1.14)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02022Integrase_Zn

Integrase Zinc binding domain

ClanCL0123HTH

External Links

ECOD PDB View: 8FNJ RCSB PDB: 8FNJ PDBe: 8FNJ

Downloads

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