ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8fnpA3 - ECOD Domain | ECOD

ECOD/Domains/e8fnpA3

e8fnpA3

UID: 003080754

PDB

Range: A:49-213
PDB: 8FNP chain A(all domains)

Molecule: Lamina-associated polypeptide 2, isoform alpha,Integrase chimera

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Ligands

in contact, ≤ 4 Å

DolutegravirDLU
drugDrugBank DB08930
Magnesium ionMG
metal
Zinc ion

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 8FNP RCSB PDB: 8FNP PDBe: 8FNP

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.