ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8fsdD2 - ECOD Domain | ECOD

ECOD/Domains/e8fsdD2

e8fsdD2

UID: 003081060

PDB

Range: D:309-471
PDB: 8FSD chain D(all domains)

Molecule: Serine hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySHMT(3016.1.1.5)

Ligands

in contact, ≤ 4 Å

LevoleucovorinFFO
drugDrugBank DB11596
N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 8FSD RCSB PDB: 8FSD PDBe: 8FSD

Downloads

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+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.