ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1c8fA1 - ECOD Domain | ECOD

ECOD/Domains/e1c8fA1

e1c8fA1

UID: 000030831

PDB

Range: A:37-584
PDB: 1C8F chain A(all domains)
UniProt: P24840 (all domains)

Molecule: FELINE PANLEUKOPENIA VIRUS CAPSID

3D Structure

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Related Domains

Browse other domains in Parvo_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyParvo_coat(10.2.1.9)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Parvovirus coat protein VP1/VP2

ClanCL0605ssDNA_NP_VP

External Links

ECOD PDB View: 1C8F RCSB PDB: 1C8F PDBe: 1C8F UniProt: P24840

Downloads

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