ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7gjwA1 - ECOD Domain | ECOD

ECOD/Domains/e7gjwA1

e7gjwA1

UID: 003085346

PDB

Range: A:187-302
PDB: 7GJW chain A(all domains)

Molecule: 3C-like proteinase

3D Structure

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Related Domains

Browse other domains in Peptidase_C30 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCoronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain(6001)

HH-groupCoronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain(6001.1)

TT-groupCoronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain(6001.1.1)

FFamilyPeptidase_C30(6001.1.1.1)

Ligands

in contact, ≤ 4 Å

(4S)-4-{2-[(1R,4R)-5-acetyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]-2-oxoethyl}-6-chloro-N-(isoquinolin-4-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamideQR9

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05409Peptidase_C30

Coronavirus endopeptidase C30

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 7GJW RCSB PDB: 7GJW PDBe: 7GJW

Downloads

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